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Chlamys islandica, Anarhichas lupus and Climate Change

After posting to the Scallop of Hearts to TO95%, I remembered it’s Blog Action Day for the cause of climate change awareness.

One of the major concerns with climate change relates to habitat changes for the plants and animals. Will aspen survive anywhere in the United States? What trees will be able to survive in Connecticut in 2050? 2100? Where will elk be able to survive in 2100?

Of course these aren’t easy predictions to make since each species has distinct environmental requirements. Even more troubling though is that many have complex relationships with other organisms, both beneficial and detrimental. Then there are the often complex food webs that each species is a member. some webs are resilient to loss of several species but others collapse with the loss of only one.

While sea temperatures are generally more stable than air temps in terrestrial systems, many of the marine animals have even tighter requirements for temperature. Even a change in just a few °C can prevent reproduction, reduce lifespans, or even cause death. That is the case with the Icelandic Scallop. In some recent experiments it was found that the scallops had a significantly higher mortality in temperatures above 12°C. Average summer sea surface temperatures off Iceland’s southern coast have been in excess of 10°C in recent years and have been rising. A +2°C change over the previous decades has brought the average summer sea surface temperature very near the scallop’s maximum threshold. While the scallops are still able to survive, there has been a marked increase in adult mortality.

Icelandic Scallop - Image from http://www.osl.gc.ca/guide_sp/en/invert/sp/c-islandica.html

Icelandic Scallop - Image from http://www.osl.gc.ca/guide_sp/en/invert/sp/c-islandica.html

Increasing temperature may not directly be the primary cause of the recent increases in mortality of the scallops, though it has been strongly implicated. In recent years, a protozoan parasite has affected much of the stock of C. islandica around Iceland. As with the scallop itself, many protozoan parasites have been found to have temperature thresholds and ideal temperature ranges. For instance Perkinsus atlanticus populations under controlled experiments did not grow, in temperatures of 5°C, grew slowly at 16°C, and grew quickly at 20°C and 26°C. It also failed to grow and died out after 4 days at an experimental temperature of 37°C. Similarly, two other protozoan parasites of interest on the Atlantic Coast are also temperature controlled: Parkinsus marinus, the cause of the disease dermo in oysters, requires temperatures above 25°C to thrive, Haplosporidium nelsoni, which causes MSX in oysters (although it can survive and multiply at temperatures of 5°C-25°C) requires temperatures above 20°C to infect a new oyster. Temperature is likely also a controlling factor in the spread of the protozoan infecting C. islandica.

While the Iceland Scallop is what instigated this post, the topic of climate change and its effect on marine animals, particularly fish, is one I have been thinking of a lot lately. In much the same way that the scallops are temperature limited, fish have ideal and survivable temperature ranges, and temperature can play a significant role on growth and reproductive success. Complicating the issue is that many of the fish have very specific habitat preferences or needs as well.

Atlantic Wolffish - Photo copyright Peter Auster from http://www.nurc.uconn.edu/bigmouthfishes/photos/SBNMS/content/neg7_large.html

Atlantic Wolffish - Photo copyright Peter Auster from http://www.nurc.uconn.edu/bigmouthfishes/photos/SBNMS/content/neg7_large.html

Take for instance the Atlantic Wolffish (Anarhichas lupus) a species of increasing concern in the Gulf of Maine, if fact they are likely to be soon added to the Endangered Species Act. They are a wonderful (dare I say beautiful) fish with some great characteristics and a face only a mother, or a crazy marine biologist, could love! They feed mainly on molluscs, crustaceans and echinoderms using their huge canines. They are a large benthic fish, growing up to 5 feet and weighing up to 40 pounds.

They are also a slow growing and late maturing species. Growth and maturity varies with temperature fluctuations, but generally they are reproductively mature by 6 years or about 16 inches total length. Spawning pairs of male and female form in the spring with actual spawning period varying, possibly as a function of temperature. As with many species, reproductive success increases as females grow larger and older, producing both more eggs and more viable eggs (ranges from 5,000 to 12,000 eggs per season). The female lays her eggs in holes and around boulder reefs. The male then begins a fast, loses his teeth, and guards the eggs for four to nine months of egg incubation (again a function of temperature). Four to nine month fasting and guarding the eggs. Think about that one guys!

wolffish pair from CLF (credit: Jonathan Bird) on Vimeo.

One of the cool things about wolffish is the presence of anti-freeze in their body, which allows them to survive, even thrive, in extremely cold waters. In the wild they have been caught in trawl surveys in waters from -1.9°C to 14°C. In the laboratory they survived temperatures as high as 17°C, but feeding was strongly negatively correlated with the higher temperatures.

So temperature is a major factor on the wolffish, but so is habitat. Wolffish are most often found in rocky reefs or seaweed beds on hard substrate from 80m to 180m depths, but range as deep as 650m and can, on occasion, be found in coastal shallows. My most memorable dive in New England remains being about 3 feet away from a 4 foot wolffish in the cove just off Avery Point in late November.

Young wolffish keep to the deeper, colder part of their range where temperatures remain -1°C to 4°C. Only mature fish are found in shallower ranges and higher temperatures with an upper temperature limit of 10°C.

My thoughts recently have related mainly to mapping the current and potential future ranges of some of these animals using habitat suitability modeling techniques in geographic information systems (GIS), including especially ecological niche factor analysis (ENFA). Using what we know of their habitat requirements (for the wolffish: -1°C-10°C, boulder reefs for spawning, 80m-200m depth, and abundance of lobster, crab, urchin or molluscs) we can map the current optimal and sub-optimal ranges. It doesn’t mean they’ll be there, but it is where the potential for finding them should be highest, based on our understanding of their requirements. By altering the temperature and depth components to match forecasts based on climate change models, we can look ahead to forecast the likely range of the animals, and even the decade by decade march or retreat of suitable habitat.

An example of using mulitple habitat factors with multipliers to determine ecological niche. From http://www2.unil.ch/biomapper/

An example of using mulitple habitat factors with multipliers to determine ecological niche. From http://www2.unil.ch/biomapper/

For some animals the outlook is pretty bleak. The combination of habitat requirements and temperature requirements will drive them completely out of the Gulf of Maine and potentially out of the Western Atlantic entirely. There are many fish that are at their breeding temperature limits in the Gulf of Maine already, including many commercially important species. Some marine animals are existing in virtual islands of suitable habitat formed by complexities of depth, substrate type and complexity, currents and temperature, among many other factors.

The challenge is to identify, for each species or community, which of these factors are most important for both the organism’s survival and our modeling efforts. Unfortunately, especially in the marine realm, there is still so much we don’t know about the ecological requirements of may of the animals and communities. Even mapping the seafloor at resolutions comparable to our maps of terrestrial areas continues to be challenge. It often surprises many people I talk to when they find out that almost all our knowledge of marine animal populations and habitat characteristics comes from commercial fisheries and from sample trawls by the NMFS. Most species that are not targets of fisheries or considered commercially important have not been studied extensively, if at all.

Trawler bringin up it's haul - from http://en.wikivisual.com/images/f/fb/Fish_on_Trawler.jpg

Trawler bringin up it's haul - from http://en.wikivisual.com/images/f/fb/Fish_on_Trawler.jpg

In the marine environment it is very challenging to accurately predict how communities will respond to warming waters and how individual species ranges will change, simply from lack of direct observation. We are getting better at using the important data we do have, and have identified proxies for the data we simply do not have, but we need more time in the water with ROV’s and DSV’s for direct observations, especially of the continental shelf and deep sea ecosystems.

Wolffish eating a sea urchin from CLF (credit: Jonathan Bird) on Vimeo.

References

Burreson, E., & Ford, S. (2004). A review of recent information on the Haplosporidia, with special reference
to Haplosporidium nelsoni (MSX disease) Aquating Living Resources, 17 (4), 499-517 DOI: 10.1051/alr:2004056

Hagen, N., & Mann, K.H. (1992). Functional response of the predators American lobster Homarus americanus (Milne-Edwards) and Atlantic wolffish Anarhichas lupus (L.) to increasing numbers of the green sea urchin Strongylocentrotus droebachiensis (Müller) Journal of Experimental Marine Biology and Ecology, 159 (1), 89-112 DOI: 10.1016/0022-0981(92)90260-H

Jonasson, J., Thorarinsdottir, G., Eiriksson, H., & Marteinsdottir, G. (2004). Temperature tolerance of Iceland scallop, Chlamys islandica (O.F. Muller) under controlled experimental conditions Aquaculture Research, 35 (15), 1405-1414 DOI: 10.1111/j.1365-2109.2004.01159.x

King, M.J., Kao, M.H., Brown, J.A, & Fletcher, G.L. (1989). Lethal freezing temperatures of fish:
limitations to seapen culture in Atlantic Canada. Proc Ann Aquacult Assoc Can., 89 (3), 47-49

Ordás, M., & Figueras, A. (1998). In vitro culture of Perkinsus atlanticus, a parasite of the carpet shell clam Ruditapes decussatus Diseases of Aquatic Organisms, 33, 129-136 DOI: 10.3354/dao033129

One last awesome video of a wolffish!

Wolffish devouring a crab from CLF (credit: Jonathan Bird) on Vimeo.

Deadly Waters For Whom?

How was your opinion of sharks formed?

All my life I have struggled to overcome negative exposure to sharks. I think I have won, but it has been a long haul.

My earliest memory of sharks is from 1975. I was spending the night at a friend’s house. Across the street from his building was the base movie theater. All that Friday night we were scared witless by the constant screams we heard coming out of that theater during the three showings. We had seen the posters on the movie theater billboard and our imaginations filled in all the rest, which is not too hard for imaginative 7–year–olds. It would be years later before I actually saw the movie, which only reinforced my abject fear of sharks.

Fortunately, my folks exposed me to National Geographic and the Cousteau Society, so I was also exposed to sharks as amazing animals and important parts of the ecosystem. Yet, whenever we’d visit the coast and go swimming, in the back of my mind I would worry about the sharks. As an adult in the Caribbean, I was revisited by that fear when I began diving. I have to admit my greatest concern when I began diving was that I was entering their realm. I slowly got over that fear (mostly) as I got more dives under my belt, including several dives with reef and nurse sharks. Then came Somalia.

In Somalia there was a strict order not to swim in the beautiful waters around Mogadishu. I have to tell you it is VERY tempting to take a small dip in the water to escape the equatorial heat, especially when you’ve been riding convoys in full battle gear and are caked in sweat, dust, and dirt. A moment of wading in cool salt water to escape it all was very inviting. I wanted nothing more, but the order was there for a reason. In a little over a year 6 UNOSOM workers were bit by sharks in Mogadishu. Three died of their injuries. I knew Mogadishu was a unique place for the sharks. The area had become a rich hunting ground for them, thanks in part to a history of townspeople throwing carrion and refuse into the waters nearby. Eventually the UN installed a shark fence around the beaches at the airport. I wonder if it’s still there.

To the south in Kismayo, I did a couple dives with several sharks in the area. My job was to keep an eye out for sharks while the underwater specialists carried out their jobs. I was pretty scared, but I was young and dumb and diving with a bunch of seriously gung–ho types, so I wasn’t about to admit it. The funny thing is the sharks were there, but their behavior was very non-threatening, even the largest of them. They occasionally came into view, swam lazily at a distance, then receded back into the blue. They were not terribly interested in us or our activities.

I continue to dive, even in the “dive by touch” conditions that the locals call “high visibility” in Long Island Sound. I have studied sharks a bit more and the critical part that many sharks play as part of their ecosystem. Intellectually, I know that even as a diver and someone who works in the marine environment, I am less likely to be bitten by a shark than I am to be struck by lighting or electrocuted by my toaster. Yet, in the back of my mind, there is still a little kernel of concern. When I see the replica of the great white in the cafe on campus (caught just outside of Long Island Sound), or I hear of the juvenile great white found in the estuary near here, I find myself having to shake off that fear and refocus my thoughts.

I have been fortunate to see sharks up close in the wild and I realize that they are not the killing machines that the media often portrays them as. Even the Discovery Channel uses sensationalism and fear to sell their Shark Week. I haven’t watched Shark Week for several years, since I was disgusted by their inaccurate and sensationalistic portrayal of sharks the last time I did watch. Shark Week then was about 80% fear and sensationalism, 15% interesting factoids, and 5% conservation, proactive education, and recent science. The shame is that Shark Week could be a force for genuine education about shark conservation and the importance of sharks in the ecosystem.

I certainly hope that they have changed their portrayal of sharks, especially since the sharks are in desperate need of our help. Even Peter Benchley, the author of Jaws, expressed his deep regret over having written Jaws after the damage it caused.

“Knowing what I know now, I could never write that book today,” said Benchley, who also co-wrote the screenplay for “Jaws.” “Sharks don’t target human beings, and they certainly don’t hold grudges.”

Unfortunately, with shows such as “Deadly Waters” and “Sharkbite Summer” in the lineup, it doesn’t look likely. I could take a very optimistic view and hope that “Deadly Waters” is describing the terrible daily massacre of sharks for shark fin soup. Maybe “Sharkbite Summer” is about us putting the figurative bite on sharks. But as far as the Shark Week advertising and show titles go on the Discovery Channel website, the message is still all about fear.

I mean really, how far have we come in 34 years??

The 1975 film poster for Jaws

The 1975 film poster for Jaws

and 34 years later, the 'Web Poster' for Shark Week 2009

and 34 years later, the 'Web Poster' for Shark Week 2009


David (aka WhySharksMatter) at Southern Fried Science is a marine biologist studying sharks and working everyday on shark conservation and public education. He and other shark scientists and conservationists are taking the issue to Discovery Channel and challenging their portrayal. The best part is, you can help. Southern Fried Science will host an interview with Discovery Channel Senior Science Editor and Executive Producer Paul Gasek. Paul will give his side of the story, which David says he is eager to do, but David also wants to show him a range of questions from all over the community. Help us by visiting David’s call for questions and submitting any questions about sharks and the portrayal they get in the media. David will select 10 questions to use for the interview with Paul Gasek.

The Next Phase

What a difference two weeks makes! I had an opportunity at UCONN for my M.Sc., but with no financial support and working a project that is not related at all to what I want to study. When I turned that one down, which was in itself a scary – some might say stupid – move, I thought that would be the end of the road for grad school at UCONN. But then a surprise opportunity presented itself for graduate studies with another professor at UCONN. When I was applying I considered him, but he didn’t have funding available to support a new graduate student at that time. With the economic cutbacks no new department assistantships are available, so support is entirely up to the professors. The department is also requiring that advisors can provide proof of substantial support for any new grad students this year. Fortunately, Prof. A. was able to rearrange some of his funding so that he could provide a research assistantship. To say the least, I’m ecstatic about the opportunity: GIS, conservation, a smattering of policy and lots of fish (my focus being larval stages and recruits), and fish habitat.

The Johnson Sea Link II being deployed from the R/V Seward Johnson.

The Johnson Sea Link II being deployed from the R/V Seward Johnson for Life on the Edge 2005

Prof. A. is also with the National Underwater Research Center for the North Atlantic & Great Lakes at UCONN (NURC-NA&GL or just NURC for short). Working for NURC, I have had the opportunity to work with some amazing video footage from dives they have done with many different platforms, including Alvin out of Woods Hole Oceanographic Institute (WHOI) and both the Johnson Sea Link I and Johnson Sea Link 2 (collectively “the JSLs”) manned research subs out of Harbor Branch Oceanographic Institute (HBOI). Unfortunately HBOI and Florida Atlantic University (FAU) have decided to retire the the Sea Link I and II and sell off their surface support vehicle, the R/V Seward Johnson. With depth ratings of 1000m these are two of the deeper diving vehicles in the U.S. science fleet. While the Alvin and Pisces V (out of Hawaii) both go far deeper, the JSLs are unique human operated vehicles (HOVs) for deep sea exploration with their distinctive full transparent acrylic sphere for the pilot and scientist. The sad thing is these are still highly productive vehicles (two of the youngest in the fleet) and there are no similar subs out there, in fact there are only about 16 manned research subs currently in operation world wide. It would especially be a shame if two of the research subs most suited to intermediate continental margin and continental shelf exploration were retired by the very same institution that was just selected as the lead institute for the Harbor Branch Consortium, which will be NOAA’s new cooperative institute. Two of their new primary missions will be “exploration and research of frontier regions of the eastern continental shelf and beyond, and improved understanding of deep and shallow coral ecosystems.” I would think this would be an excellent fit for the Sea Links. On a personal note, Alvin and the JSLs were inspirational to me when I was younger. I remember the National Geographic spreads from JSLs especially. To this day when someone says manned sub, my mind’s eye sees the Johnson Sea Link II* (Sorry Alvin!). Kevin also has a more powerful connection to the JSLs since he’s been down in them before (Check out the pic of Kevin in the bubble! Very Cool!). He also has a top ten list of JSL accomplishments, including over 1000 publications reliant on JSL.

Some people question the real need for manned submersibles, arguing that ROV’s like Hercules, Jason and Kraken II can do anything a manned vehicle can do, only better and safer. It’s a valid question, and one that needs to be repeatedly asked, especially as more advanced ROV’s designed from the ground up for science come on line. But my answer today is that there is a need for both of them still. ROVs can not go everywhere an HOV can, and their mobility and responsiveness are limited, compared to HOVs, by the ever-present tether to the mother ship. An ROV also lacks the ability to provide 3D visual-spatial analysis and true in-situ contextual observations which only a scientist and pilot on the spot can provide, at least with todays technology. ROV’s while extremely capable are still a telepresence technology, and many of those that have used both HOVs and ROVs, such as Dr. Craig McClain at Deep Sea News, attest that something significant is lost in that translation.

These experiences combined to give me a first hand knowledge of an environment, that previously I had only studied remotely. I studied the deep sea for three years before my first deep dive and my understanding, although incomplete, of this environment has radically changed since those dives in the JSL.

Perhaps more important, these manned submersibles stir the imaginations of young minds, leading them, like me, to dream abut exploring the sea, maybe one day sitting in awe within a submersible 1 kilometer below the surface, surrounded by organisms we are still only beginning to comprehend fully.

Please help us let those in control of the JSLs fate aware of the JSLs importance to science and to our ability to understand the seas and stir the imaginations of the young explorers in our midst. Young explorers like Johann. Please GO SIGN A PETITION TO STOP THEIR LOSS.

So, a bit more on the new NOAA Cooperative Institute, since that also directly affects my future. NURC-NA&GL, along with all the other NURC centers, are NOAA supported, non-federal organizations under NOAA’s National Undersea Research Program (NURP). NURC-NA&GL’s mission is as a center for excellence in research related to the North Atlantic and Great Lakes region. They work with NOAA scientists on long term research goals including developing oceanographic research technologies (such as the Kraken II), fisheries and conservation research, historical site identification and documentation along with major outreach efforts. They are also tasked with Postdoc and graduate student training to provide the next generation of oceanographers. Unfortunately NURC-NA&GL may lose all NOAA funding with the establishment of the new center at HBOI, as it will replace the four existing East Coast NURC centers, including the one at UCONN. Personally I think cutting support for the existing centers is a mistake, even though the new Cooperative Institute sounds wonderful.

So my summer and the next two years are set, sort of. There are still some questions (second year funding, nailing down the thesis topic, now that we have health insurance, do we have another baby, etc., etc.), but at least the path forward is clear enough to begin charging down it! The summer will be hectic, split between two projects for NURC (video and GIS outreach products for high school teachers and students to use and possibly video highlights from a recent deep sea cruise), two projects for Prof. A. (both habitat related), a cruise for Prof. A, and then the remainder of my time will be dedicated to finishing up an outreach book and cards for grades K-12+ on molluscs. Whew!

4473*Johann pointed out that even Playmobil recognizes the JSLs and their full sphere compartments as the iconic submersible.

What is your iconic research submersible? Is it Human operated or remote?

Whatever it is, please do Sign the petition to keep the JSLs operating.

Check out the Deep Sea News collection of JSL videos.


NASA TV

We are watching STS-125, the final shuttle mission to repair the Hubble Telescope. Right now Michael J. Massimino and Michael T. Good are in the 6th hour of their spacewalk to repair the STIS package on the Hubble, including a cover with 111 tiny screws.

This is a special mission for us, one we feel connected to if only in some extremely remote way. We watched the ramp up and mission development on NOVA Science Now about a year ago. In the mean time we have followed the writings of Phil Plait, who writes Bad Astronomy, and worked on the Space Telescope Imaging Spectrograph, or STIS package that is being worked on today. This mission also features K. Megan McArthur, an Oceanographer trained at Scripps, as one of the mission specialists. She’ll be the last person to handle Hubble.

Of course we have enjoyed so any of the shots from Hubble in the Astronomy Picture of the Day (APOD) so we desperately want to enjoy many more fine images and discoveries.

We have also found another connection to the recent space adventures in what might seem an odd place. The Beagle Project, which aims to rebuild the HMS Beagle to set out on round the world science and outreach in the spirit of the great explorations of Darwin et al. have become partners with the ISS and NASA. Karen James’ infectious enthusiasm for this partnership have been rubbing off on us here.

It was not a straight forward mission to begin with, but somehow they managed to find all sorts of problems and issues that got in the way. Things got tense and it seemed as though everything was going to hell in a hand basket quickly, yet they stayed on it and eventually overcame all the problems to successfully replace the STIS.

Perseverance.

Graduation

It’s official. I have graduated.

Last week I finished up the last exams, presentations and papers for my undergraduate career. I couldn’t relax and celebrate though, as I had two looming projects that were due on Thursday which had been thrown on the back burner during finals. Finally though, those projects are done and I can sit back and relax and reflect on graduating and whatever that means.

On the whole though I find graduation to be really rather anti-climatic. Maybe it is because I figured I would be headed to graduate school right away, maybe because I thought I would see a clear path forward for some reason. Whatever the case there is no real sense of accomplishment, victory or whatever. Not sure what exactly I thought I would feel, but whatever it was, this ain’t it.

Actually I feel a bit of a loss if anything. No more classes, no more twice a week seminars and no more access to so many journals.

As for graduate school, well, things haven’t worked out quite so well as I wanted there, at least not yet. It looks like I will be working as a tech at Avery Point on a couple of projects for the summer. Not full time work, but enough and most of it dealing with deep sea and ecology, and one week at sea, so very enjoyable.

After that things are rather undecided. There is a potential position for the fall working on a GIS project, and I’m sure something would come up for the spring. In the mean time in the fall I will reapply to work with the professors of interest and look at jumping straight into a PhD program. In the mean time I have been accepted at UCONN, though the project didn’t work out and there is no funding. But maybe I can get one class in each semester, since the state will pay the tuition fees (Combat Vet benefits). We’ll see.

The good thing is I have more free time now to dedicate to spending with my family and doing more photography and blogging again. I also plan to try and do some of the experiments I planned for my masters thesis at home with Tammy and Johann, just for the fun of it. We should be able to get the organisms and we can set up the experimental aquaria. We just won’t be able to do it on a larger scale for the replication needed to do the stats.

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