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Graduation

It’s official. I have graduated.

Last week I finished up the last exams, presentations and papers for my undergraduate career. I couldn’t relax and celebrate though, as I had two looming projects that were due on Thursday which had been thrown on the back burner during finals. Finally though, those projects are done and I can sit back and relax and reflect on graduating and whatever that means.

On the whole though I find graduation to be really rather anti-climatic. Maybe it is because I figured I would be headed to graduate school right away, maybe because I thought I would see a clear path forward for some reason. Whatever the case there is no real sense of accomplishment, victory or whatever. Not sure what exactly I thought I would feel, but whatever it was, this ain’t it.

Actually I feel a bit of a loss if anything. No more classes, no more twice a week seminars and no more access to so many journals.

As for graduate school, well, things haven’t worked out quite so well as I wanted there, at least not yet. It looks like I will be working as a tech at Avery Point on a couple of projects for the summer. Not full time work, but enough and most of it dealing with deep sea and ecology, and one week at sea, so very enjoyable.

After that things are rather undecided. There is a potential position for the fall working on a GIS project, and I’m sure something would come up for the spring. In the mean time in the fall I will reapply to work with the professors of interest and look at jumping straight into a PhD program. In the mean time I have been accepted at UCONN, though the project didn’t work out and there is no funding. But maybe I can get one class in each semester, since the state will pay the tuition fees (Combat Vet benefits). We’ll see.

The good thing is I have more free time now to dedicate to spending with my family and doing more photography and blogging again. I also plan to try and do some of the experiments I planned for my masters thesis at home with Tammy and Johann, just for the fun of it. We should be able to get the organisms and we can set up the experimental aquaria. We just won’t be able to do it on a larger scale for the replication needed to do the stats.

This Day I Don’t Need

Some days it’s better just saying in bed.

For me, today was that day.

Avery Point Fire Alarm Parade (2 of 2)

Ah, the beauty of Avery Point and the Castle blanketed in a layer of calming white snow. Until the klaxon sounds and sirens wail.

Just to hit the high spots:
Very tired this morning after insomniatic night -> Roads not plowed -> three car pile up on the highway -> highway traffic diverted onto my commute route -> 15 minute commute (+15 for unplowed streets) now takes 57 minutes -> miss Chemistry lecture.

Trying to pack for Ft. Lauderdale trip interupted by two 20 minute fire alarms, both false alarms! Finally got the three crates full of the nav and video systems for the cruise, they are on the way. Hopefully they make it to Ft. Lauderdale and don’t end up in Ft. Leavenworth.

Mystic Christmas Parade (1 of 2)

One of three hook and ladder trucks which responds to every Marine Science building alarm. I don’t mean that to imply that there are a lot of alarms.

Laptop died at ~8:40am -> three major projects, all due in next 1-3 weeks on dead laptiop, not to mention three almost complete web site redesigns I figured to complete while on the plane. Fortunately it’s only the video board -> after school Tammy and sick Johann accompany (very tired) me to Genius Bar where they verify, yes it’s the NVidea board. They have replacement mainboard in stock, 3-4 days to replace. Whew! Excellent Indian food from the food court(!!) as celebration.

I managed to get the projects off the laptop before we left for Providence by booting it blind as a firewire harddrive to the iMac. Slow process, but at least I’m safe there. 2 hours sleep in the past 48. This day.. you can have it back (though I’ll keep the vindaloo and nan in the food court, thank you!) Now to sleep perchance to dream, or if not just forget this day.

Deep Sea Fishing Impacts Sea Mounts

Deep Sea News and Seamounts in PLoS

ResearchBlogging.orgDr. McClain over at Deep Sea News recently published a very readable open access paper at PLoS ONE about the potential connectedness of seamounts and nearby habitats. I love that the paper was highly accessible, both in the writing and the fact that anyone can download it from PLoS One and read it for free, especially since, in the case of Davidson Seamount and Monterey Canyon, there are significant implications on management policies, if the goal is to protect and preserve the diversity within the canyon.

A Little Closer to Home

Tim Shank and his lab have been doing a lot of work on connectivity, including genetic analysis, among and between the seamounts of the North Atlantic, especially the New England Seamounts and the Corner Rise Seamounts. Though I haven’t seen any papers yet (I believe Walter Cho is working on this for his Ph.D.) what I have been exposed to is that they are finding connectivity between seamounts and seamount areas, but it is a complex situation with very different connectivity from one species to the next, one depth to the next and one region to the next. Connectivity factors likely include reproduction and recruitment strategies, bathymetry, depth, habitat availability, and hydrodynamics (regional and local).

So Why Should We Care?

Ultimately understanding how these deep sea ecosystems are interconnected is critical for conservation and management of marine resources, including potentially many commercially important species (and the deep sea cephalopods who lay egg capsules on the deep corals, thank you very much!). It needs to be studied further to understand the extent of the connectivity. Connectivity studies have a significant number of challenges though, not the least of which is the seemingly simple task of identifying the interaction time and space scales of the relevant processes. In part these define the boundaries of populations. Identifying all the species using traditional morphological taxonomy and molecular techniques, can be a herculean task as well.

Unfortunately, the seamounts are also being impacted by deep sea fishing. Trawling across the mounts can remove entire communities of slow growing deep sea corals and the complex communities they support, potentially causing a significant effect on the deep sea coral community connectivity as well.

My Tiny Personal Connection

This last year I have been working part time with video captured on several deep sea cruises to the New England Seamount Chain and the Corner Rise Seamounts. Much of the work has been producing support video and a DVD for a variety of presentations, which I can’t present here. I can, however, finally show one piece of the package I put together, which was the last piece we did to give to the funding partners.

Your Seamounts on Fishing


The Future?

While I loved deep sea biology and invert communities before, spending many hours scouring HD video of these invert communities helped really hook me on the idea of studying them long term. As I watched the communities of inverts on the screen I had so many questions about their distribution, their physiological adaptations, limitations on growth and distribution, recruitment triggers, etc… etc… etc. I would love to be able to study these communities, the larval distribution, development and recruitment for the communities and individual species, and the ecological and anthropogenic pressures on these communities.

(Yes, I would still also love to study cephalopods and larval development and ecology within the mangroves, still lot’s of wake-me-up-in-the-middle-of-the-night questions there too!)

Notes

All footage in the piece was taken on the 2005 Deep Atlantic Stepping Stones mission, but not necessarily from the same dive or on the same seamount. The final sequence is the result of an otter door impacting and dragging across a part of the Kükenthal Seamount. An otter-door is a large metal rudder that holds the trawl nets wide open.

There is more impact footage from the mission, including trash and meters upon meters of clean parallel lines cut through communities of coral and sponges where the rollers on the bottom of the net rolled through. The otter door impact zone, however, was the starkest example of clearing the communities from the seamount in the video I surveyed, devastating damage.

Sources and Further Reading

Peter J. Auster, Jon Moore, Kari B. Heinonen, Les Watling (2005). A habitat classification scheme for seamount landscapes: assessing the functional role of deep-water corals as fish habitat. Cold-Water Corals and Ecosystems, 761-769 DOI: 10.1007/3-540-27673-4_40

Craig R. McClain, Lonny Lundsten, Micki Ream, James Barry, Andrew DeVogelaere (2009). Endemicity, Biogeography, Composition, and Community Structure On a Northeast Pacific Seamount PLoS ONE, 4 (1) DOI: 10.1371/journal.pone.0004141

Rhian Waller, Les Watling, Peter Auster, Timothy Shank (2007). Anthropogenic impacts on the Corner Rise seamounts, north-west Atlantic Ocean Journal of the Marine Biological Association of the UK, 87 (05) DOI: 10.1017/S0025315407057785

Hurry Up, Daddy and Graduate!

Johann is checking into the various blogs and websites we allow him on right now. He’s standing in front of the computer singing. Of course, he just finished reading this Ph.D. comic….

phd070204s

So this is the soundtrack to my work right now (yes, I’m going crazy!!):

Hurry Up, Daddy and Graduate!
(To the tune of Joshua fit the Battle of Jericho, Mahalia Jackson style)

Hurry up, Daddy and graduate, graduate, graduate.
Hurry up, Daddy and graduate and get into graduate school.

Got to get into grad school.
Got to get in there soon.
Got to get into grad school,
Before all the money’s gone. Sooooooo…

Hurry up, Daddy and graduate, graduate, graduate.
Hurry up, Daddy and get into graduate school soon.

You want to study inverts.
You want to study the deep sea.
Got to study the thermal vents,
So get into grad school now, you know ya got to go.

Hurry up, Daddy and graduate, graduate graduate.
Hurry up, Daddy and graduate, ’cause you know you got to go.

Go to go get your masters.
Two years, then we’re gone.
Got to get your masters real soon,
then move on somewhere else.

Hurry up, Daddy and graduate, graduate, graduate.
Hurry up, Daddy and graduate, so we can all go to the next stage.

You always talk about Richard.
Always talkin’ ’bout Cindy.
You always talk about Lauren
and Alvin toooooo. Ohhh…

Hurry up, Daddy and graduate, graduate, graduate.
Hurry up, Daddy and graduate.

Hurry up, Daddy and graduate, graduate, graduate.
Hurry up, Daddy and graduate so we can study more.

We gotta go! Gotta go!
Gotta go to get your Ph.D.!

Economic Crisis

As I apply for grad schools the big issue seems to be the money…
This comic strip hits way too close to home!

phd011609s

10% cuts came already and now the painful ones are coming… not that the 10% cuts weren’t already painful. Hopefully I can find my way into grad school despite the cuts…

Applications are in to UConn, Rutgers and URI for masters programs. Feelers went to Duke and WHOI but both of those are very long shots since the deadlines for this year have already past and they are Ph.D. only programs.

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