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Category Archives: Science

Deep Sea Trawling for the Farmers wife

As many of you many know I have been working on some video to portray the beauty and diversity of deep sea mounts and the devastation caused to them by deep sea trawling.  I stumbled upon an old news article from New Zealand in which I found a great quote by Steve O’Shea on deep sea trawling -

In effect, it’s the same as trying to herd cows up with a net and dragging a net through a farm. You catch a few cows. You catch the farmers wife. You catch a cattle trough. All this other stuff is incidental bi-catch, filth, bottom filth they refer to it. We just don’t do that on land. Why are we doing it in the oceans?

So close…

Summer is almost here… 

It’s just one more week and I’m through with the semester from hell.

It’s not that any of the classes were that hard, though Reaction and Transport comes close enough. The problem is that I got involved in many other activities and overextended myself again.

My last class was yesterday with Prof. A. Unfortunately, I had a team presentation to give, along with a group paper to turn in. My partner is a humanities type with little experience using PowerPoint, Keynote, or any other computer software for presenting… so… I had to do all the presentation design and development. For most classes I wouldn’t have sweated that too much, but this is Peter and Matt, both of whom I respect a lot and will be going out to sea with this summer. On top of that, I’m working with Peter on at least one DVD and now a video podcast expanding on the work in the previous DVD we made. 

Thursday we (my project partner and I) met to layout the battle plan. “Hmm… We have a 15 page paper and a 20 minute presentation due in 20 hours…What should we do?”

Two all-nighters later, everything is done. The paper was turned in electronically a few hours late (as in this morning), but we had a kick-*$$ presentation that will now be leading to participation in a published paper working with the same data set and expanding the analysis I did for the project. The analysis was quite the pain in the you know where, as the data is old, incomplete, and from an area I know very little about. Then again, maybe that helped me, since I had few pre-conceived notions and no idea of what had or had not been tried before. 

Just one more paper to write, three take home exams, and one in class exam. Then I can pass out.  For a week. Except Tammy has a “Honey please finally do” list I have been ignoring now for months that needs some action. And then there is the summer activities plan. And, of course, I owe her about a week of snuggle time.

Oh, and in my copious free time, I have managed to get an entry or two up at The Other 95%, though I doubt I will be able to contribute to Coral Week even sitting on a couple hours of video of deep sea corals and deep sea trawl fishing effects. Arggghhh!

Soon.

Summer Filling Up Fast

The semester is almost (but not quite) over, and already the summer is filling up fast.

  • I will as usual have 20+ hours a week working IT for the Science Department.
  • May and June will be making a 10-15 minute video DVD for deep sea trawling impacts on seamounts. Of course that means I have to go through a ton of footage to get the gems and the ones that really highlight the damage. 
  • End of June I will be taking a 1 week cruize to Stellwagen Bank to participate in a cruise looking at fishing effects, area closure effects etc using ROVs and towed video sleds.
  • There will be more video and illustration work June through August as part of an ongoing research piece with another of the professors. 

How the heck am I going to get in any dive time?!

Earthday 2008

At the Earthday celebrations were yesterday (tree planting, drum circle, giveaways of CFL lights, recycled reusable water bottles, speeches, ice cream, CT DEP demonstrations, hybrid car showings - not bad for a campus of only 500 or so people. 

Since today is the more widely recognized day though… a few quick quotes / links

 
“Never doubt that a small group of thoughtfully committed citizens can change the world. Indeed, it’s the only thing that ever has.” 
Margaret Mead

 

Rick MacPherson of Malaria, Bedbugs, Sea Lice & Sunsets will be joining Kevin Zelnio of The Other 95% and Deep Sea News, Jason Robertshaw of Cephalopodcast and Karen James of The Beagle Project Blog for part of a 24 hour long conversation about the health of our planet. Their segment starts at 2200 GMT (that’s 6pm EST).

Thanks Rick for the book. Arrived safe and sound! Very beautiful too!
Highly recommended for all!

A few other links for your perusal this morning:

EcoDaredevil

The Times Magazine Green Issue

 Hattips go out to Rick, Kevin and Sheril

Update: was sorta captured at the event playing football with some of the undergrads from school

Johann at at Avery Point\'s Earthday

Johann’s Journal - Science Week

Last week we went to Providence for two science conferences. I had fun. I sat in on some really neat talks. One was about lobster larvae and another was about Alaskan oyster farming. I ate mussels. I worked behind the front desk. We went to the beach party and had fun playing all the games and contests. I got a special award for helping. I made lots of friends.

The End.

Johann joins the NSA

Last week was very busy for us here. I volunteered to help out one of the people at the University who was in charge of organizing and putting on the NSA conference and the Benthic Ecology Meeting which were held back to back in Providence. Ostensibly I was supposed to be there primarily for IT support, but ended up helping with a variety tasks from stuffing bags helping people overcome issues with their presentations, to making lunch runs. Truth be told it was exhausting, but very fun - of course now I am paying the price for missing a week of school and school work…but it was worth it.

The organizer of the conferences knows ’s love of science and was very generous, providing and Tammy with passes to get into the event and attend talks. As a family we attended a number of the talks, but the whole family ended up volunteering behind the scenes, stuffing programs and helping hand out newsletters, sell raffle tickets, etc… On Thursday the closing NSA evening event and opening Benthic Ecology Meeting event was a viewing of the IMAX movie Volcanoes of the Deep Sea with opening introduction by NSA member and deep sea biologist Richard Lutz. Richard also had a 20 minute question and answer period afterwords with several questions from the few kids in the audience including a pair of insightful questions from .

We all had great fun, especially meeting some of the wonderful people involved in the meeting and attending it including Kathy Johnston, Richard Lutz, Sammy Ray, Roger Mann, Ken Chew and many, many others.

and Tammy were invited back by everyone to the Saturday evening event to close the Benthic Ecology Meeting - a Beach Party in the hotel ballroom. had a blast with playing volleyball with all the scientists and grad students. It was great fun and hilarious to watch the beach balls fliying into the chandeliers. (My legs are still killing me from all the running and diving.) They also had “Benthic Twister”, limbo contests, a Hawaiian shirt contest and a hula hoop contest. Who knew Tammy could hula hoop for hours straight?!

The highlight of the evening however for was his receiving a certificate of appreciation and participation from the organizer. He had a taken with all the volunteers as he received his certificate. We will hopefully be able to get a copy of the soon to post. The certificate is now going up over his study desk. As one of the PhD students said “Wow, he’s gonna have a better C.V. by the time he’s in high school than I have now!” Heck he’s gonna have a better one than I do!!

New Real Estate

It looks like both Dad and I have some new digital real estate.

My father is a professional photographer and now has a web site to show some of his works. I love his bear series of photographs and hope you will too. The cool thing is that he is also providing some facts and information about some of these magnificent animals. I often have to wonder if the work he will do as a photographer will have more impact in informing people’s opinion about nature and than my plans as a scientist or science communicator.

My own photography has taken a back seat to school and I do miss it. I especially love doing underwater video and work. If I could make an impact by producing a book or being on the team that produces a book on the beauty of underwater life similar to the magnificent and inspirational books Reef by Scubazoo or The Deep: The Extraordinary Creatures of the Abyss, I would jump at the chance. I love underwater photography even more than doing nature photography above water.

Speaking of science communication, I will now be participating in a multi-author blog called The Other 95% (TO95% for short). It is a site mostly dedicated to talking about invertebrates and the latest news, science publications, jokes, videos, etc. related to .

I just put up my first posting there, about recent discoveries of social and complex mating rituals in a species of octopus. I hope you will look at it and enjoy. I took this on in part to help myself become a better writer and in part to help spread the beauty of , especially cephalopods.

Women Scientists

There is a meme out there for naming women scientists. Well with ’s scientists cards and his love of science as well as science, we felt like playing along. So here are some of the scientists that we came up with, most of them off the top of our heads:

While most of these we came up with without resources, it helped for some of them that has his “Scientist Trading Cards” list, which all of these ladies are on. I figure his lists are the equivalent to “class notes” for us. When we have time maybe we can do a part two… that and go back and hyperlink these to bio pages and lab pages. ed. Done!

Oh and for the record Penny Boston and Diana Northup have some of the coolest named study subjects (at least for ): Snottites and phlegm balls.

S’not funny. That’s what they study… no really.

Caprellids

Ok…if you want to find out what a Caprellid is without the family spin skip to the bottom.

One of the family’s big presents this year was a nice zoom dissecting microscope with a set of 50 metazoan and 50 plant biology classroom slides. and Tammy have been going through a few prepared slides per session, but whenever he gets on the scopes at the university, he usually gets to look at bacteria through the epifluorescent scopes or all kinds of zooplankton through the dissecting scopes there, so it is not really the same looking at a dead, prepared slide, many of which are largely unrecognizable as being something once alive.

For one of my classes last week, we did a bivalve particle clearing rate experiment using some mussels (Mytilus edulis) gathered from the water just off campus. As I was separating out some of the mussels in the lab, I noticed a ~15mm character in a preying mantis pose — it looked almost like a walking stick doing a Karate kid final kick, a Caprellid amphipod. I separated the small mussel it was on from the rest of the bunch and put it aside in a beaker. After everything was cleaned up from the experiment, I took the mussel and amphipod home to and Tammy.

When I got home, I set the beaker on the kitchen counter while I stripped off the book satchel, laptop, coat, etc… before I was done was already staring closely at the two occupants of the beaker. By the time I had turned back around, he assaulted me with, “Cool! What is that?! That’s mytilus, but what is THAT?!”

Caprellid Amphipod

He spent the next hour watching both the caprellid and the mussel, (Gotta love low heat light sources!), calling Tammy and me over to examine some detail he had noticed or watching for some new behavior he just witnessed. The caprellid mostly repeated a pretty set cycle: it did its characteristic pose and swayed its upper body through the water, then remained still for minutes at a time. It did occasionally maneuver to a new location with it’s inchworm style motion.

The mussel opened and closed periodically, which allowed to observe the mantle skirt closely. It also began to cement its byssel threads to the beaker using its foot. watched this both through the scope and with the naked eye. After an hour he had sketched both thoroughly and was done for the night. Tammy, , and I decided we can’t tell exactly what species the caprellid was, though we suspect it is a male Caprella mutica, an invasive species known to be here in the Long Island Sound, specifically in the Mystic estuary.

Caprellid amphipod

I took the opportunity to see if I could hand hold the camera and get a decent shot through the scope, with and without one of the 15x occulars in place. While not as nice as having a dedicated imager like we have in the teaching lab, it is a decent result for hand held and a good starting point. I’m thinking about modifying a lens cap/body cap to help in alignment and holding the camera in place.

So what is a caprellid amphipod?

Caprellid amphipods (a.k.a. skeleton shrimp) are small crustaceans which have been found on diverse habitats from deep ocean hydrothermal vents to shallow estuarine waters. These small amphipods spend their entire life attached to some form of substrate — usually seaweeds, and encrusting or non-mobile invertebrates such as barnacles, bryozoans, and mussels. They are also often found on docks,ropes, and nets used in aquaculture. Using the last three pairs of appendages, they cling to seaweed, bivalves, or other substrate with their claws (gnathopods) spread wide as they bend side to side waving through the water.

“That’s a caprellid,” said Dr. Jon Moore. To demonstrate its behavior, he and Mercer Brugler invented the “Caprellid dance,” holding up both hands and waving them, while shifting hips from side to side. This made clear to everyone what kind of organism they were looking at.
“Oh yes, the caprellid!”

Log from the NOAA Mountains of the Sea exploration:
May 15 2004

Caprellids appear to be omnivorous opportunists, eating anything including diatoms, copepods, amphipods, and nematodes. In turn they are eaten by a variety of fish, thus they form a link between the single celled algae and predatory fish.

cmutica.jpg

A Caprella mutica male (top) and female from Dr. Gail Ashton’s work at SAMS

Caprella mutica is a fairly recent invader to Long Island Sound. Originally from the shores of Japan and China, it was confirmed in Connecticut waters when it was found at the Mystic Yacht Yard in 2003. C. mutica has also successfully colonized most of Europe’s shores, the Pacific Northwest, and New Zealand. Part of its success stems from its tolerance for a wide range of temperatures (-1.8 to 30°C) and salinities (15 — 35+psu). (Ashton et al. 2007)

Ashton, G. V., Willis, K. J., Cook, E. J. & Burrows, M. (2007). Distribution of the introduced amphipod, Caprella mutica Schurin, 1935 (Amphipoda: Caprellida: Caprellidae) on the west coast of Scotland and a review of its global distribution. Hydrobiologia 590, 31-41
DOI 10.1007/s10750-007-0754-y

Kingdom: Animalia
Phylum: Arthropoda
subPhylum: Crustacea
Class: Malacostraca
Order: Amphipoda
Family: Caprellidea
Genus: Cabrella
species: Caprella mutica

Guess who….

CRW_2501.jpg